Checked by Nadide Hazal Avcı, Chase Olsson, Brandon Nelson, and Mohammad Movassaghi
1. Procedure
A.
2-(2,4-Difluorophenyl)-5-(trifluoromethyl)pyridine, (dF(CF3)ppy) (3). A 500 mL, three-necked (24/40 joints), round-bottomed flask is equipped with a 3.5 cm length × 1.5 cm width magnetic stirring bar, a cold water reflux condenser, an argon inlet on top of the reflux condenser, and two yellow plastic stoppers (
Note 1). A plastic stopper is removed temporarily and the flask is flushed with argon for 5 min before being sequentially charged with
2-chloro-5-(trifluoromethyl)pyridine (
1) (
Note 2) (6.00 g, 33.1 mmol, 1.00 equiv),
(2,4-difluorophenyl)boronic acid (
2) (
Note 3) (5.74 g, 36.4 mmol, 1.10 equiv),
Pd(PPh3)4 (
Note 4) (2.44 g, 2.11 mmol, 0.064 equiv),
benzene (
Note 5) (36 mL),
ethanol (
Note 6) (7.2 mL) and 2.0 M aqueous
sodium carbonate (
Note 7) (30 mL) under argon. The argon inlet is then turned off from the source, and the flask's neck through which the reagents were introduced is recapped with the plastic stopper. The flask is then placed in a 70-75 °C preheated silicon oil-bath, equipped with a reflux condenser, and stirred (Figure 1A) (
Note 8). Heating is stopped after 72 h and the flask is carefully raised from the oil bath and the dark brown mixture is allowed to cool to room temperature.
Water (100 mL) is added to the mixture and the resulting biphasic solution is then transferred into a 1 L separatory funnel and the flask is rinsed forward with
DCM (200 mL). The bottom dark brown organic layer is separated and the top clear colorless aqueous layer is extracted with
DCM (1 × 200 mL). The combined organic layers were transferred into a 1 L separatory funnel and washed with
water (1 × 50 mL) followed by brine (1 × 100 mL). The organic layer is then passed through a bilayer pad of silica gel and anhydrous
MgSO4 (Figure 1B) (bottom layer, silica gel (150 g), 200-400 mesh particle size; top layer, anhydrous
MgSO4 (50 g)) in a 600-mL porous glass fritted Büchner funnel under high vacuum into a 1 L round-bottomed flask. The filter pad is rinsed through with
DCM (3 × 200 mL) and the clear yellow filtrate is concentrated under reduced pressure by rotary evaporation (30 °C, <15 mmHg) to give 8.6 g of
dF(CF3)ppy (
3) as an off-white shiny solid (
Note 9). The solid is dissolved in 3 mL
DCM and 3 mL hexane solution and then charged on a column (2.5 in × 18 in) of 171 g of silica gel (60 Å, 200-400 mesh), which had been equilibrated with hexanes:EtOAc (90:10) and eluted with hexanes:EtOAc (90:10) under gentle air-pressure. At that point, collection of 25 mL fractions is begun, and the elution continues with 1.5 L of hexanes:EtOAc (90:10). The desired product is obtained in fractions 10-25 according to TLC analysis, which are concentrated under reduced pressure by rotary evaporation (30 °C, < 15 mmHg) to give 7.81 g (
Note 10) (90% yield) of
dF(CF3)ppy (
3) as a pink-white solid.
Figure 1A. Reaction set up; 1B. Vacuum-filtration set up. (Photographs provided by the submitters)
2. Notes
1. Other types of stoppers including glass stoppers and rubber septa can also be used.
2.
2-Chloro-5-(trifluoromethyl)pyridine (
1) was purchased from Aldrich and used as received as a crystalline white solid (no information on purity was provided by the supplier).
3.
(2,4-Difluorophenyl)boronic acid (
2) was purchased from Aldrich and used as received as an off-white solid (no information on purity was provided by the supplier).
4.
Pd(PPh3)4 (99%) was purchased from Strem and used as received as a bright yellow shiny solid.
Pd(PPh3)4 was weighed out in air into a 20 mL glass vial immediately before use.
5.
Benzene (anhydrous, 99.8%) was purchased from Aldrich and used as received.
6. Ethanol (200 proof, anhydrous, ≥99.5%) was purchased from Aldrich and used as received.
7. A 2.0 M
Na2CO3 solution was prepared by dissolving 6.40 g of
Na2CO3 in 30 mL of deionized
water.
8. The reaction can be monitored by TLC silica gel (hexanes-EtOAc; 90:10); product R
f = 0.66.
9. Although the solid was purified by silica gel chromatography, the off-white shiny solid can be carried on to the next step without further purification.
10. A second reaction on identical scale provided 7.72 g (89%) of the product. R
f = 0.66 (10% EtOAc/hexanes), UV-lamp visualization (254 nm):
1H NMR
pdf(400 MHz, CDCl
3) δ: 9.00 (s, 1H), 8.09 - 8.14 (m, 1H), 7.99 (d,
J = 8.4 Hz, 1H), 7.91 (d,
J = 8.4 Hz, 1H), 7.04 (td,
J = 9 Hz, 1 Hz, 1H), 6.95 (t,
J = 8.8 Hz, 1H);
13C NMR
pdf(100 MHz, CDCl
3) δ: 164.8 (d,
J = 12.2 Hz), 162.8 (d,
J = 12.2 Hz), 161.8 (d,
J = 11.9 Hz), 159.8 (d,
J = 12.0 Hz), 155.6, 146.4, 133.6 (d,
J = 3.0 Hz), 125.2 (q,
J = 32.5 Hz), 123.7 (q,
J = 272.2 Hz), 123.6 (d,
J = 11.3 Hz), 112.1 (d,
J = 21.3 Hz), 104.5 (dd,
J = 26.9 Hz, 25.5 Hz);
19F NMR
pdf(282 MHz, acetone-d
6 Referenced to TFA at
-76.55 ppm) δ: -63.7, -108.5, -113.4; FTIR (thin film): 1599.5, 1478.5, 1392.0 1326.7, 1299.7, 1283.8, 1261.8, 1165.7, 1118.9, 1108.9, 1082.3, 1017.5, 969.2, 950.5, 869.8, 856.6, 823.8 , 818.1, 772.8, 720.0, 710 cm
1;
HRMS (ESI)
m/z calcd for C
12H
7F
5N [M+H
+] 260.0493, found 260.0477. Elemental anal. calcd for C
12H
6F
5N : C, 55.61 ; H, 2.33; F, 36.65 ; N, 5.40 , found: C, 55.86; H, 2.51; N, 5.32.
11.
Iridium(III) chloride hydrate (reagent grade) was purchased from Aldrich and used as received.
12.
2-Ethoxyethanol (99%, Reagent plus) was purchased from Aldrich and used as received. It is important to note that the reaction proceeded with similar efficiency when 2-methoxyethanol that was purchased from Aldrich was used instead of
2-ethoxyethanol.
13. The excess
dF(CF3)ppy (
3) was removed by rinsing the yellow solid with 13:1 MeOH/DCM mixture.
14. A reaction performed on half-scale provided 2.81 g (34%) of the product. This complex was carried on to the next step without purification. The
1H NMR spectrum showed traces of the monomer.
1H NMR
pdf(400 MHz, acetone-
d6) δ: 9.63 (s, 2H), 8.68 (dd,
J = 8.8 Hz, 2.1 Hz, 2H), 8.52 (dd,
J = 8.7 Hz, 2 Hz, 2H), 6.71 - 6.66 (m, 2H), 5.21 (dd,
J = 9 Hz, 2.2 Hz, 2H);
13C{
1H} NMR
pdf(125 MHz, (CD
3)
3SO) δ: 167.1, 166.5, 164.5, 163.4, 162.5, 161.3, 160.1, 159.4, 156.1, 150.2, 148.9, 147.0, 137.7, 136.8, 126.3, 125.7, 124.4, 123.9, 123.3, 122.8, 122.6, 122.2, 114.2, 111.4, 99.4.
19F NMR
pdf(282 MHz, acetone-
d6 Referenced to TFA at -76.79 ppm) δ: -62.7, -105.2, -108.6; FTIR (thin film): 1600.9, 1576.0, 1382.8, 1326.3, 1312.0, 1295.8, 1252.0, 1179.4, 1166.0, 1136.2, 1106.8, 1090.2, 1048.1, 992.3, 844.5, 832.6, 722.2, 717.4 cm
-1. Elemental anal. calcd for C
48H
20Cl
2F
20Ir
2N
4 : C, 38.74; H, 1.35; Cl, 4.76; F, 25.54 ; Ir, 25.84 ; N, 3.77 , found : C, 38.77 ; H, 1.40 ; F, 25.36 ; N, 3.86.
15. The molecular weight (MW) of the monomer (744.009 g/mol) was used to calculate the mmol.
16.
2,2'-Bipyridine (bpy, >99%) was purchased from Aldrich and used as received. The use of excess of this reagent is essential for the yield and purity of the final complex.
17.
Ethylene glycol (99.8%) was purchased from Aldrich and used as received.
18. The reaction mixture changed from a yellow-slurry to a clear orange solution during heating.
19.
NH4PF6 (≥ 95%) was purchased from Aldrich and used as received.
20. Prior to additional purification, the product contains trace unknown impurity.
21. A second reaction on identical scale provided 2.79 g (65%) of the identical product.
1H NMR
pdf(400 MHz, acetone-
d6 ) δ: 8.90 (dt,
J = 8.3 Hz, 1.1 Hz, 2H), 8.62 (dd,
J = 8.8 Hz, 2.7 Hz, 2H), 8.41 (m, 4H), 8.31 (d,
J = 5.5 Hz, 0.8 Hz, 2H), 7.97 (s, 2H), 7.80 (ddd,
J = 7.7 Hz, 5.5 Hz, 1.2 Hz, 2H), 6.86 (ddd,
J = 12.8 Hz, 9.3 Hz, 2.3 Hz, 2H), 5.97 (dd,
J = 8.4 Hz, 2.5 Hz, 2H);
13C{
1H} NMR
pdf(125 MHz, acetone-
d6) δ: 168.9 (d,
J = 8.2 Hz), 166.8 (d,
J = 12.9 Hz), 164.7 (dd,
J = 13.2 Hz, 4.7 Hz), 162.6 (d,
J = 13.4 Hz), 157.1, 156.4 (d,
J = 7.5 Hz), 152.7, 147.4 (d,
J = 5.1 Hz), 141.9, 138.5 (d,
J = 3.5 Hz), 130.4, 128.1 (dd,
J = 5.0 Hz, 2.9 Hz), 126.6, 125.1 (d,
J = 21.4 Hz), 123.3 (d,
J = 271.7 Hz), 115.7 (dd,
J = 18.1 Hz, 3.5 Hz), 100.6 (t,
J = 27.2 Hz);
19F NMR
pdf(282 MHz, acetone-
d6 Referenced to TFA at
-76.79 ppm) δ: -63.4, -71.3, -73.8, -104.6, -107.9; FTIR (thin film): 1602.6, 1575.4, 1386.9, 1298.3, 1180.9, 1167.9, 1142.0, 1109.6, 1090.4, 991.9, 866.0, 838.2, 768.5, 735.1, 721.6 cm
-1; HRMS (ESI)
m/z calcd for C
34H
18F
10IrN
4 [M
+] 865.0996, found 865.0995. Elemental anal. calcd for C
34H
18F
10IrN
4 : C, 41.02 ; H, 2.07 ; F, 29.66 ; Ir, 18.76 ; N, 5.47, found : C, 41.08 ; H, 2.11 ; F, 29.42 ; N, 5.51.
22.
4,4'-Bis(tert-butyl)-2,2'-bipyridine (
dtbbpy, 98%) was purchased from Aldrich and used as received. The use of excess of this reagent is essential for the yield and purity of the final complex.
23. The
1H NMR spectrum showed an unknown impurity in the aromatic region. The impurity was removed by dissolving the solid in acetone/MeOH mixture and the pure product was crashed out of the solution with hexanes.
24. A reaction performed on half-scale provided 1.52 g (73%) of the identical product.
1H NMR
pdf(400 MHz, acetone
-d6 ) δ: 8.93 (d,
J = 1.9 Hz, 2H), 8.61 (dd,
J = 8.9 Hz, 2.6 Hz, 2H), 8.40 (dd,
J = 8.9 Hz, 2.1 Hz, 2H), 8.18 (d,
J = 5.9 Hz, 2H), 7.76 - 7.86 (m, 4H), 6.89 (ddd,
J = 12.7 Hz, 9.3 Hz, 2.3 Hz, 2H), 5.97 (dd,
J = 8.4 Hz, 2.3 Hz, 2H), 1.43 (s, 18H);
13C{
1H} NMR
pdf(125 MHz, acetone
-d6) δ: 169.1 (d,
J = 8.3 Hz), 166.8 (d,
J = 12.8 Hz), 164.7 (dd,
J = 13.3 Hz, 8.3 Hz), 162.6 (d,
J = 13.4 Hz), 157.2, 157.0 (d,
J = 7.4 Hz), 152.3, 146.9 (d,
J = 5.1 Hz), 138.4, 128.0, 127.3, 125.3 (d,
J = 431.3 Hz), 125.2 (q,
J = 33.8 Hz), 124.8 (d,
J = 21.1 Hz), 123.1 (d,
J = 271.3 Hz), 115.6 (dd,
J = 18.0 Hz, 3.4 Hz), 100.4 (t,
J = 27.2 Hz), 36.9;
19F NMR
pdf(282 MHz, acetone
-d6 Referenced to TFA at -76.79 ppm) δ: -66.6, -71.3, -73.8, -104.6, -107.9; FTIR (thin film): 2970.1 1603.1, 1576.0, 1329.8, 1314.3, 1297.1, 1251.4, 1179.4, 1168.2, 1137.3, 1108.4, 1090.3, ; HRMS (ESI)
m/z calcd for C
42H
34F
10IrN
4 [M
+] 977.2248, found 977.2260. Elemental anal calcd. for C
42H
34F
10IrN : C, 45.43 ; H, 3.28 ; F, 26.74 ; Ir, 16.91 ; N, 4.93, found : C, 45.18 ; H, 3.06 ; F, 26.78; N, 5.09.
3. Discussion
Based on the work by Malliaras and Bernhard on the synthesis of
5,
6 we have developed a practical scalable synthesis of
[Ir{dF(CF3)ppy}2(bpy)]PF6 (
4) and
[Ir{dF(CF3)ppy}2(dtbbpy)]PF6 (
5) in grams quantities from readily available starting materials. The first step of the syntheses involves a palladium-catalyzed Suzuki-Miyaura cross-coupling reaction of
2-chloro-5-(trifluoromethyl)pyridine (
1) and
(2,4-difluorophenyl)boronic acid (
2) to give
dF(CF3)ppy (
3). We found that the original procedure
6 for the Suzuki-Miyaura reaction provided excellent yields at increased scale (9-20 grams scale, 95-99% yield). The second step of the synthesis involves complexation between IrCl
3.H
2O and
dF(CF3)ppy (
3) to give the advanced intermediate as an air and moisture stable dimeric complex
[(dF(CF3)ppy)2-Ir-μ-Cl]2. The
1H-NMR spectrum of this complex shows trace amount of the monomeric complex. While both
1H- and
19F NMR spectra could be obtained in acetone-
d6, a satisfactory
13C NMR spectrum of this dimeric complex could not be obtained. However, the checkers were able to obtain a
13C NMR after gentle heating (30 °C) of this complex in DMSO-
d6. The
1H-NMR spectrum of this complex is identical to that reported by Malliaras and Bernhard.
6 We found that increasing the reaction time from 12 h to 48 h was essential for the full formation of the complex. Attempts to recrystallize this complex resulted in a significant loss of yield. However, the only contaminant in the complex is the excess
dF(CF3)ppy (
3), which was completely removed by washing the complex with a MeOH/DCM solvent mixture after which the complex was taken to the next step without further purification. The final step in the syntheses is the treatment of
[(dF(CF3)ppy)2-Ir-μ-Cl]2 with bpy or
dtbbpy ligand followed by
NH4PF6 under our optimized conditions to give
[Ir{dF(CF3)ppy}2(bpy)]PF6 (
4) and
[Ir{dF(CF3)ppy}2(dtbbpy)]PF6 (
5) respectively. The syntheses of
[Ir{dF(CF3)ppy}2(bpy)]PF6 (
4) and
[Ir{dF(CF3)ppy}2(dtbbpy)]PF6 (
5) were performed on milligram to 10 gram scales following the procedures described in this report. These air and moisture stable Ir-complexes can be stored at room temperature and used as photoredox catalysts as demonstrated by the selected examples in Scheme 1.
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