1. Procedure (Note 1)
B.
(2-Bromo-1-hydroxyethyl)MIDA boronate (3). In an oven-dried 2000-mL single-necked, round-bottomed flask equipped with a 6.5 cm Teflon-coated magnetic stir bar is charged with
oxiran-2-yl MIDA boronate (
2) (15.6 g, 78.4 mmol, 1 equiv) and
acetonitrile (780 mL, 0.1 M) (
Note 2) under ambient atmosphere. To the suspension is added
LiBr (34.0 g, 392.0 mmol, 5.0 equiv) (
Note 11) and
glacial acetic acid (67.3 mL, 1180 mmol, 15.0 equiv) (
Note 12) at room temperature (
Note 6) where the flask is equipped with an adapter (19/22) connected to a manifold. The resulting mixture is allowed to stir at room temperature for 2.5 h (
Note 6) under ambient atmosphere (
Figure 2). The solvent is removed
in vacuo (30 °C, 20 mmHg) and the crude residue is dissolved in EtOAc (1000 mL) (
Note 13) and
acetone (300 mL) (
Note 14). The mixture is washed with deionized
water (1 x 500 mL), then separated. The aqueous layer is extracted with EtOAc/
acetone (3 x 650 mL, 5:1.5 EtOAc/
acetone ratio) (Notes
13 and
14). The combined organic phase is dried over anhydrous Na
2SO
4 (250 g) (
Note 15), filtered, and concentrated
in vacuo (30 °C, 20 mmHg). The crude product
(2-Bromo-1-hydroxyethyl)MIDA boronate (3) (20.5 g, 94% crude yield) is carried over to the next step without further purification (Notes
16 and
17).
Figure 2. Reaction mixture after stirring at room temperature for 2.5 h
C.
(2-Bromoacetyl)MIDA boronate (4). In an oven-dried 2000-mL single-necked, round-bottomed flask equipped with a 6.5 cm Teflon-coated magnetic stir bar is charged with crude
(2-Bromo-1-hydroxyethyl)MIDA boronate (
3) (20.1 g, 71.6 mmol, 1 equiv),
acetonitrile (360 mL), and
ethyl acetate (360 mL, 0.1 M combined) (Notes
3 and
13). The suspension is allowed to stir at room temperature (
Note 6) for 20 min in order for
3 to completely dissolve in solution. Upon solvation, the mixture is cooled to 0 °C (
Note 18) and stirred at 0 °C for 10 min. To the solution is added
Dess-Martin periodinane (
DMP) (36.5 g, 86.0 mmol, 1.2 equiv) (
Note 19) in one portion (
Figure 3A). The resulting suspension mixture is equipped with an adapter (19/22) connected to a manifold and is allowed to stir at 0 °C (
Note 18) for 1 h. After stirring for 1 h, the reaction suspension is diluted with a 1:1 mixture of
ethyl acetate/
acetonitrile (720 mL) (Notes
3 and
13), whereby the liquid phase is slowly decanted through a Büchner funnel by vacuum filtration into a 2000-mL round-bottomed flask (
Note 20). The volatiles of the filtrate are removed
in vacuo (30 °C, 20 mmHg) to afford a yellow residue (
Note 21). The resulting residue is suspended with
ethyl acetate (600 mL) (
Note 13) and a 6.5-cm Teflon-coated magnetic stir bar and stirred at room temperature (
Note 6) for 0.5 h under ambient atmosphere. The mixture is filtered through a pad of Celite (
Note 22)
via vacuum filtration into a 1000-mL round-bottomed flask (
Note 23). The volatiles of the filtrate are removed
in vacuo (30 °C, 20 mmHg) and to the resulting residue is added a 1:1 mixture of EtOAc/
acetone (60 mL) (Note
13 and
14) and a 6.5 cm Teflon-coated stir bar. The mixture is sonicated and stirred to afford a thick suspension.
Diethyl ether (600 mL) (
Note 7) is added over a period of 5 min, then the mixture is stirred at room temperature for an additional 10 min (
Note 6). The suspension is filtered through a medium fritted funnel via vacuum filtration where the resulting filter cake is allowed to dry under vacuum (
Note 24) The filter cake is then collected and added to a 3000-mL round-bottomed flask equipped with a 6.5 cm Teflon-coated stir bar and charged with
ethyl acetate (300 mL) and
dichloromethane (500 mL) (Notes
13 and
25). The suspension is allowed to stir for 0.5 h at room temperature (
Note 6) under ambient atmosphere.
toluene (2000 mL) (
Note 26) is then added to the stirring suspension over 5 min at which point the flask is equipped with a rubber sleeve stopper septum and stirred for 16 h at room temperature (
Note 6). The suspension is filtered through a medium fritted funnel by vacuum filtration, then the filter cake is collected and allowed to dry under vacuum (
Note 27). The resulting solids are then added to a 2000-mL round-bottomed flask equipped with a 6.5 cm Teflon-coated stir bar. The flask is charged with
acetone (500 mL) (
Note 14), equipped with a rubber sleeve stopper septum, then cooled to 0 °C (
Note 18) and stirred for 1 h. After 1 h, the suspension is filtered through a pad of Celite (
Note 18) by vacuum filtration into a 1000-mL round-bottomed flask. The volatiles of the filtrate are removed
in vacuo (20 °C, 10 mmHg) to obtain the desired product,
(2-Bromoacetyl)MIDA boronate (4) (8.9 g, 45%), as a colorless solid (Notes
28,
29, and
30) (
Figure 3B).
Figure 3. A) Reaction mixture after addition of DMP; B) Final product (4)
2. Notes
1. Prior to performing each reaction, a thorough hazard analysis and risk assessment should be carried out with regard to each chemical substance and experimental operation on the scale planned and in the context of the laboratory where the procedures will be carried out. Guidelines for carrying out risk assessments and for analyzing the hazards associated with chemicals can be found in references such as Chapter 4 of "Prudent Practices in the Laboratory" (The National Academies Press, Washington, D.C., 2011; the full text can be accessed free of charge at
https://www.nap.edu/catalog/12654/prudent-practices-in-the-laboratory-handling-and-management-of-chemical. See also "Identifying and Evaluating Hazards in Research Laboratories" (American Chemical Society, 2015) which is available via the associated website "Hazard Assessment in Research Laboratories" at
https://www.acs.org/content/acs/en/about/governance/committees/chemicalsafety/hazard-assessment.html. In the case of this procedure, the risk assessment should include (but not necessarily be limited to) an evaluation of the potential hazards associated with
vinyl MIDA boronate,
acetonitrile,
3-chloroperbenzoic acid,
silicon oil,
diethyl ether,
glacial acetic acid,
ethyl acetate,
acetone, deionized
water, anhydrous
sodium sulfate4, Dess-Martin periodinane (
DMP), Celite,
dichloromethane,
lithium bromide,
glacial acetic acid,
toluene, and
mesitylene.
Reactions and subsequent operations involving peracids and peroxy compounds should be run behind a safety shield.
2.
Vinyl MIDA boronate (
1) was purchased from Sigma-Aldrich (97%) and was used as received.
Vinyl MIDA boronate (
1) can also be separately synthesized on scale using the procedure reported by Burke and co-workers.
3
3.
Acetonitrile was purchased from Caledon Laboratory Chemicals (99.9% pure) and was used as received. The checkers purchased
acetonitrile (99+%, extra pure) from Acros Organics and used it as received.
4.
3-Chloroperbenzoic acid (≤77%) was purchased from Sigma-Aldrich and was used as received. An excess of 2.2 equiv was used in order for the reaction to go to completion. The use of fewer equivalents of
m-CPBA resulted in incomplete conversion as well as diminished yield of the desired product.
5.
Silicon oil was purchased from Sigma-Aldrich and was used as received. The checkers purchased
silicon oil from Alfa Aesar and used it as received.
6. Room temperature was monitored to be 20~25 °C during the course of experiments. The internal reaction temperature was dropped to 15 °C from 25 °C after the addition of
3-chloroperbenzoic acid.
7.
Diethyl ether was purchased from Fisher (99.0% pure) and was used as received. The checkers purchased
diethyl ether (≥ 99.5%) from Tansoole and used it as received.
8. A second reaction on half scale provided 8.0 g (98%) of the product
2.
9. Spectroscopic analysis of
2:
1H NMR
pdf (400 MHz,
Acetonitrile-
d3) δ: 2.23 (br s, 1H), 2.57 (dd,
J = 5.6 Hz, 3.6 Hz, 1H), 2.80 (t,
J = 5.6 Hz, 1H), 3.06 (s, 3H), 3.79 (d,
J = 16.8 Hz, 1H), 3.85-4.03 (m, 3H);
13C NMR
pdf (100 MHz,
Acetonitrile-
d3) δ: 45.1, 47.1, 62.7, 62.9, 168.5, 169.6;
11B NMR
pdf (192 MHz,
Acetonitrile-
d3) δ: 10.1. Carbon atoms exhibiting significant line broadening brought about by boron substituents were not reported (quadrupolar relaxation). HRMS of
2: [ESI-MS] (M+Na
+)
m/z calculated for C
7H
10BNO
5Na: 222.0544;
m/z found = 222.0542. mp 195-197 °C. IR (film): 1746, 1451, 1284, 1239, 1169, 1034, 955, 901, 852, 605 cm
-1.
10. The purity of
2 was determined to be 96% by quantitative NMR
pdf spectroscopy with
mesitylene (97%) as the internal standard (a mixture of 3.4 mg of
2 and 4.3 mg of
mesitylene was used to determine purity).
Mesitylene (97%) was purchased from Sigma-Aldrich and was used as received.
11.
Lithium bromide was purchased from Sigma-Aldrich (≥99%) and was used as received. The checkers purchased
lithium bromide (99%) from Alfa Aesar and used it as received. A large excess of
LiBr (5.0 equiv) was used in order to significantly reduce the reaction time to the order of hours instead of days. This effect was noted in the initial report by Bajwa and Anderson.
4
12.
Glacial acetic acid was purchased from Fisher (99.7% pure) and was used as received. The checkers purchased
glacial acetic acid (99.5%) from Tokyo Chemical Industry Co., Ltd. and used it as received. The use of acetic acid was essential for the conversion to the halohydrin. It was proposed that the reaction involves a reversible epoxide ring opening and that acetic acid drives the reaction to completion via protonation of the intermediate alkoxide.
4
13.
Ethyl acetate was purchased from Fisher (99.9% pure) and was used as received. The checkers purchased
ethyl acetate (99.8%) from Tansoole and used it as received.
14.
Acetone was purchased from Fisher (99.7% pure) and was used as received. The checkers purchased
acetone (99.5%) from Tansoole and used it as received.
15.
sodium sulfate (anhydrous) was purchased from Caledon Laboratory Chemicals (granular, 99.0% pure) and was used as received. The checkers purchased
sodium sulfate (anhydrous, 99%) from Tansoole and used it as received.
16. A second reaction on half scale provided 10.3 g (94%) of the product
3.
17. Spectroscopic analysis of crude
3:
1H NMR
pdf (400 MHz,
Acetonitrile-
d3) δ: 3.03 (s, 3H), 3.54 (s, 2H), 3.78-3.83 (m, 1H), 3.86 (s, 1H), 3.90-4.04 (m, 3H);
11B NMR
pdf (192 MHz,
Acetonitrile-
d3) δ: 10.0. HRMS of
3: [ESI] (M+Na
+)
m/z calculated forC
7H
11BBrNNaO
5: 301.9806;
m/z found 301.9803. mp 175-178 °C. IR (film): 1773, 1461, 1332, 1279, 1192, 1106, 1025, 985, 897, 861, 642 cm
-1. No purification was determined to be necessary as indicated by analysis of the crude material's
1H NMR spectrum; thus, the crude material
3 was carried onto the next step and no purity analysis was obtained.
18. In order to cool to 0 °C, the solution in the round-bottomed flask was immersed in an ice/water bath and stirred for 10 min.
19.
Dess-Martin periodinane (
DMP) was purchased from Combi-Blocks (95% pure) and it was used as received. The checkers purchased
DMP (>95%) from Tokyo Chemical Industry Co., Ltd. and used it as received.
DMP can also be prepared on scale following an
Organic Syntheses procedure reported by Boeckman, Jr. and co-workers.
5
20. This filtration step was included to remove any unreacted and undissolved
DMP. Using a medium fritted funnel at this point will cause the filtration apparatus to clog. The filtrate at this point remains a suspension. The final compound (
4) is unstable under aqueous conditions; thus, standard aqueous workup to remove
Dess-Martin periodinane by-products could not be used.
21. The crude residue should be a thick oil as the acetic acid by-product has not been removed at this point. This increases the solubility of the product and by-product in the next step.
22. Celite (technical) was purchased from ACP Chemicals, Inc. and it was used as received. The checkers purchased Celite (99.5%) from Alfa Aesar and used it as received.
23. This filtration step was included to partially separate insoluble
DMP by-products.
24. The crude solid is a mixture of product and
DMP by-product.
25.
Dichloromethane was purchased from Caledon Laboratory Chemicals (99.5% pure, stabilized with 50 ppm 2-methyl-2-butene) and it was used as received. The checkers purchased
dichloromethane (99.8%) from Acros Organics and used it as received.
26.
Toluene was purchased from Fisher (99.9% pure) and it was used as received. The checkers purchased
toluene (99.8%) from Tansool and used it as received.
27. The crude solid is a mixture of product and 2-iodosobenzoic acid (IBA).
28. A second reaction on half-scale provided 4.3 g (43%) of the product
4.
29. Spectroscopic analysis of
4:
1H NMR
pdf (400 MHz,
Acetonitrile-
d3) δ: 2.86 (s, 3H), 3.94 (d,
J = 17.2 Hz, 2H), 4.08 (d,
J = 17.2 Hz, 2H), 4.42 (s, 2H);
13 C NMR
pdf (100 MHz,
Acetonitrile-
d3) δ: 42.4, 47.8, 63.1, 168.7;
11B NMR
pdf (192 MHz,
Acetonitrile-
d3) δ: 4.4. Carbon atoms exhibiting significant line broadening brought about by boron substituents were not reported (quadrupolar relaxation). HRMS of
4: [DART-TOF] (M+H
+)
m/z calculated for C
7H
1010BBrNO
5: 276.9866;
m/z found = 276.9868. mp 155-157 °C. IR (film): 1767, 1679, 1456, 1338, 1267, 1193, 1052, 991, 896, 823, 615 cm
-1.
30. The purity of
4 was determined to be >95.0% by quantitative NMR
pdf spectroscopy with mesitylene (97%) as the internal standard (a mixture of 2.1 mg of
4 and 4.4 mg of
mesitylene was used for purity analysis).
3. Discussion
Organoboron compounds have become increasingly relevant in synthesis and drug discovery as they represent key intermediates in accessing complex small molecules/heterocycles and unique structural motifs.
6 However, methods involving the borylation of heterocycles continue to be a challenge in terms of obtaining regioselective control of the transformation. The borylation of preformed heterocycles typically involve lithiation protocols,
7 transition metal-catalyzed reactions,
8,9 and electrophilic borylation methods.
10,11 Not only do these protocols present regioselectivity challenges, but they also require elaborate and/or harsh reaction conditions. In an effort to construct borylated heterocycles in an inward fashion through a condensation/substitution strategy, our group has reported the synthesis of
α-Bromoacetyl MIDA Boronate (MIDA =
N-methyliminodiacetic acid) as a synthetically useful boron-containing building block for the construction of previously inaccessible and uniquely substituted borylated heterocycles.
12
α -Bromoacetyl MIDA boronate was synthesized by the epoxidation of commercially available
vinyl MIDA boronate (
1) with
mCPBA, furnishing the corresponding
oxiran-2-yl MIDA boronate (
2) after trituration of the crude material with
diethyl ether.
3 The epoxide was regioselectively ring-opened with
lithium bromide in the presence of acetic acid
4 at room temperature after 2.5 h to afford the desired
(2-Bromo-1-hydroxyethyl)MIDA boronate (
3). After aqueous workup and concentration, the crude product of
3 was directly carried onto the following oxidation step with
Dess-Martin periodinane, ultimately yielding
α-Bromoacetyl MIDA Boronate (
4) in good yield. Due to the instability of
4 in aqueous conditions, aqueous workup to remove
Dess-Martin periodinane byproducts could not be used. Instead, the desired building block was purified by a series of filtration/trituration protocols with
diethyl ether,
ethyl acetate,
dichloromethane, and
toluene to obtain the final product.
Copyright © 1921-, Organic Syntheses, Inc. All Rights Reserved